Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 RN7SL440P-201ENST00000577855 343 ntBASIC15.99■□□□□ 0.15
RCCD1A6NED2 SRD5A3P1-201ENST00000603021 949 ntBASIC15.99■□□□□ 0.15
RCCD1A6NED2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 AC004840.1-201ENST00000636359 365 ntBASIC15.99■□□□□ 0.15
RCCD1A6NED2 PRSS30P-206ENST00000641773 873 ntBASIC15.99■□□□□ 0.15
RCCD1A6NED2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RCCD1A6NED2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 AL645937.2-201ENST00000396808 931 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 AC107890.1-201ENST00000422478 521 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 DNAJB3-202ENST00000449667 1266 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 FAM86LP-201ENST00000478302 853 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 AC026434.2-201ENST00000506094 1078 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 KRT8P22-201ENST00000562317 1415 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 SNHG9-202ENST00000564014 471 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 AC015911.4-201ENST00000588022 1070 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 AC008738.7-201ENST00000609744 511 ntBASIC15.98■□□□□ 0.15
RCCD1A6NED2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RCCD1A6NED2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RCCD1A6NED2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 SEC63P1-201ENST00000425785 1258 ntBASIC15.97■□□□□ 0.15
RCCD1A6NED2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms