Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 AC232323.1-201ENST00000540724 2099 ntBASIC14.29□□□□□ -0.12
LRIT2A6NDA9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LRIT2A6NDA9 LINC00552-201ENST00000625151 2579 ntBASIC14.29□□□□□ -0.12
LRIT2A6NDA9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 FTLP10-202ENST00000505798 471 ntBASIC14.28□□□□□ -0.12
LRIT2A6NDA9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AC007292.2-201ENST00000593524 1812 ntBASIC14.28□□□□□ -0.12
LRIT2A6NDA9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AL035252.4-201ENST00000624174 288 ntBASIC14.28□□□□□ -0.12
LRIT2A6NDA9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.28□□□□□ -0.12
LRIT2A6NDA9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRIT2A6NDA9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 RN7SKP230-201ENST00000365642 335 ntBASIC14.27□□□□□ -0.13
LRIT2A6NDA9 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 CD8B2-202ENST00000417670 633 ntBASIC14.27□□□□□ -0.13
LRIT2A6NDA9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.27□□□□□ -0.13
LRIT2A6NDA9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 FAM197Y7-201ENST00000432892 766 ntBASIC14.27□□□□□ -0.13
LRIT2A6NDA9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms