Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 AC012508.2-201ENST00000567613 1472 ntBASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 NKAIN1P1-201ENST00000435754 582 ntBASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 TUBB8P8-201ENST00000458717 1058 ntBASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 AC021723.1-201ENST00000486306 515 ntBASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 AC044849.1-201ENST00000519737 1188 ntBASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1G3Q9Y6M4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.71□□□□□ -0.06
CSNK1G3Q9Y6M4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AC136621.1-201ENST00000624017 2304 ntBASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 MIR769-201ENST00000390225 118 ntBASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AC092506.1-202ENST00000401022 528 ntBASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AC005740.2-201ENST00000511085 419 ntBASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AL021578.1-201ENST00000613646 709 ntBASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms