Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AL354989.2-201ENST00000435838 1540 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AL139094.1-201ENST00000405549 1188 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AC091271.1-201ENST00000611877 1162 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AC009542.2-202ENST00000619004 1067 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AC006453.4-201ENST00000636949 1252 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 PRSS30P-206ENST00000641773 873 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CR383656.2-201ENST00000548656 2254 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AC007787.1-201ENST00000588095 1583 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 AC005252.3-201ENST00000623855 2258 ntBASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.88□□□□□ -0.51
TSSC4Q9Y5U2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 AC006058.4-201ENST00000624016 1670 ntBASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 Z93015.1-201ENST00000451718 390 ntBASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TSSC4Q9Y5U2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms