Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 AC015688.4-201ENST00000580780 1647 ntBASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 AQP7P5-201ENST00000428759 1049 ntBASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 AQP7P4-201ENST00000447083 1042 ntBASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 AQP7P2-201ENST00000453967 1041 ntBASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 AC106047.2-201ENST00000511723 743 ntBASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 AQP7P3-201ENST00000624547 1041 ntBASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 LAP3P2-201ENST00000454686 1454 ntBASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.96■■□□□ 1.11
CDC42BPBQ9Y5S2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CDC42BPBQ9Y5S2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.95■■□□□ 1.11
CDC42BPBQ9Y5S2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CDC42BPBQ9Y5S2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CDC42BPBQ9Y5S2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 AL132994.1-201ENST00000554098 400 ntBASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 ST5-261ENST00000626808 1071 ntTSL 5 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42BPBQ9Y5S2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 AC018638.5-201ENST00000450885 754 ntBASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 NT5C-204ENST00000578337 582 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 AL672207.1-201ENST00000328462 1570 ntBASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDC42BPBQ9Y5S2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 AL162727.3-201ENST00000635661 2787 ntBASIC21.93■■□□□ 1.1
CDC42BPBQ9Y5S2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms