Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC011474.4-201ENST00000623523 2076 ntBASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 OR2I1P-209ENST00000641730 5365 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 INTS4P2-202ENST00000614726 2019 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 CICP11-201ENST00000434745 2827 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AL645937.2-201ENST00000396808 931 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 NUS1P3-201ENST00000423502 862 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 VDAC1P7-201ENST00000462417 847 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AC190387.1-201ENST00000551683 408 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AC120045.2-201ENST00000567334 178 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AC140912.1-201ENST00000577171 1054 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AC012508.2-201ENST00000567613 1472 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 AL138799.1-201ENST00000448213 1675 ntBASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAPPC4Q9Y296 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AC099521.3-201ENST00000624251 2938 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AC113367.3-201ENST00000508316 1912 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 MYO15B-237ENST00000642007 4893 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 CRB3P1-201ENST00000449338 276 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 ENPP7P5-201ENST00000541031 1031 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 SAMD11P1-201ENST00000571429 661 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 SPDYE22P-201ENST00000582158 798 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 MIR3197-201ENST00000582241 73 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AC138761.1-201ENST00000584393 385 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AC027307.3-201ENST00000594262 1100 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AC133539.2-201ENST00000604757 467 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AC107373.2-201ENST00000607735 490 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms