Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA4Q9UN74 AC009093.2-202ENST00000620513 2079 ntBASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 AC007292.2-201ENST00000593524 1812 ntBASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 AC022210.1-201ENST00000449856 793 ntBASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 AHCYP2-201ENST00000430630 1300 ntBASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA4Q9UN74 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AC063926.3-201ENST00000624734 5658 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AC232323.1-201ENST00000540724 2099 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AC004945.1-201ENST00000416738 983 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AC119751.2-201ENST00000504529 210 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 COX5BP1-201ENST00000507622 393 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 GCOM2-201ENST00000509133 1104 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AC079316.1-201ENST00000548397 411 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 RN7SL713P-201ENST00000582127 302 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AC073413.1-201ENST00000603927 732 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 AC008687.7-202ENST00000637404 953 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 LINC00552-201ENST00000625151 2579 ntBASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms