Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
HOXC10Q9NYD6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AC006122.1-201ENST00000493323 440 ntBASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AC019193.1-201ENST00000506678 823 ntBASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 IGLV3-15-201ENST00000518356 244 ntBASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 AC103691.2-201ENST00000618824 433 ntBASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC10Q9NYD6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 AC133540.1-201ENST00000620845 1019 ntBASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 TBC1D3J-201ENST00000620719 1426 ntBASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC10Q9NYD6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms