Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AC006486.2-201ENST00000624246 2199 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AC005229.1-201ENST00000392885 409 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 SLC25A47P1-201ENST00000531577 414 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 BTNL10-201ENST00000595971 695 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AL035252.4-201ENST00000624174 288 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 KRT8P35-201ENST00000483942 1338 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 REXO1L4P-201ENST00000605109 1937 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 TNRC18P2-201ENST00000417666 2714 ntBASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PARPBPQ9NWS1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 ACTBP8-201ENST00000403258 1108 ntBASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 AC233724.13-201ENST00000598383 410 ntBASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 IGHV3-72-202ENST00000621503 303 ntBASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms