Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AL121723.1-201ENST00000445194 1519 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 YBX2P1-201ENST00000394192 760 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ZNF885P-201ENST00000420174 1098 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AL590627.1-203ENST00000421194 1026 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ACTG1P14-201ENST00000446382 1122 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 TAAR4P-201ENST00000454843 1039 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 RASA2-IT1-201ENST00000507770 612 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 MTND2P38-201ENST00000522536 667 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 KRT126P-201ENST00000549467 1181 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AL079307.3-201ENST00000556114 283 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 HNRNPA1P5-201ENST00000558213 966 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC025048.3-201ENST00000590609 569 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 OR10AE1P-201ENST00000606962 1029 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC003101.2-201ENST00000612557 442 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC005702.4-201ENST00000618393 416 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC243960.7-201ENST00000623532 707 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC120349.3-201ENST00000624377 529 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC044839.1-208ENST00000634902 917 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC105339.1-204ENST00000636249 355 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 AC106858.1-201ENST00000637497 429 ntBASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP3-1Q9BYR8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms