Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 AL157414.3-201ENST00000624276 1954 ntBASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 LILRP1-201ENST00000444199 1370 ntBASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 AP003171.2-201ENST00000528208 925 ntBASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 POM121L8P-201ENST00000417732 1281 ntBASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 POM121L9P-203ENST00000441984 1285 ntBASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.17■□□□□ 0.5
RPAP1Q9BWH6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 AL021578.1-201ENST00000613646 709 ntBASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms