Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 FOXO1B-201ENST00000504678 1527 ntBASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SEC22CQ9BRL7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 AL138918.1-201ENST00000568306 659 ntBASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 MIR4751-201ENST00000578027 74 ntBASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 LILRP1-201ENST00000444199 1370 ntBASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 AGGF1P1-201ENST00000509500 2073 ntBASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC22CQ9BRL7 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 PCDHB18P-202ENST00000526308 3197 ntBASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AL139010.1-201ENST00000454878 894 ntBASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 RNA5SP410-201ENST00000516285 106 ntBASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms