Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 POM121L10P-201ENST00000436994 1285 ntBASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 HSPB1P2-201ENST00000448722 546 ntBASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 HIST2H2BB-201ENST00000449108 381 ntBASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AL591846.1-201ENST00000451736 433 ntBASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDK5RAP1Q96SZ6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 MIR663B-201ENST00000408361 115 ntBASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 BX088702.1-201ENST00000610784 235 ntBASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AL136301.1-201ENST00000615830 422 ntBASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AP001002.3-201ENST00000623482 206 ntBASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 AC013268.4-201ENST00000637413 2228 ntBASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK5RAP1Q96SZ6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 AC092384.3-202ENST00000564646 2873 ntBASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 AC126177.1-201ENST00000547829 2218 ntBASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms