Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 AL359258.3-201ENST00000622910 2331 ntBASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 AC136621.1-201ENST00000624017 2304 ntBASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SYNGAP1Q96PV0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SSR4P1-203ENST00000599569 2260 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 ACTG1P2-201ENST00000415776 1125 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SHC1P1-201ENST00000425230 1745 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 ACTG1P11-201ENST00000425411 1125 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 FAM58BP-201ENST00000439056 645 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AC104073.2-201ENST00000453737 312 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AC134698.3-201ENST00000523880 214 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AC100827.2-201ENST00000563214 1194 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 AC006058.4-201ENST00000624016 1670 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 C18orf15-201ENST00000623680 2534 ntBASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNGAP1Q96PV0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 NUP210P1-202ENST00000504322 710 ntBASIC17■□□□□ 0.31
SYNGAP1Q96PV0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 DUX4L46-201ENST00000566845 751 ntBASIC17■□□□□ 0.31
SYNGAP1Q96PV0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SYNGAP1Q96PV0 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17■□□□□ 0.31
SYNGAP1Q96PV0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms