Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RNA5SP410-201ENST00000516285 106 ntBASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AC105233.2-201ENST00000523697 349 ntBASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AF228730.5-201ENST00000530288 346 ntBASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AP002472.1-201ENST00000577490 586 ntBASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 KRT18P58-201ENST00000527480 1120 ntBASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 RARRES2P8-201ENST00000566335 367 ntBASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 AC091812.2-201ENST00000619081 385 ntBASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 AGGF1P1-201ENST00000509500 2073 ntBASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHMP6Q96FZ7 LILRP1-201ENST00000444199 1370 ntBASIC15.21■□□□□ 0.02
CHMP6Q96FZ7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP6Q96FZ7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.21■□□□□ 0.02
CHMP6Q96FZ7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP6Q96FZ7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP6Q96FZ7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CHMP6Q96FZ7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
CHMP6Q96FZ7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP6Q96FZ7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 FAM90A12P-201ENST00000519497 2375 ntBASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 FAM90A24P-201ENST00000520792 2369 ntBASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms