Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 MIR1909-201ENST00000411312 80 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 AC134915.1-201ENST00000426461 574 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 HLA-V-201ENST00000429037 534 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 AC234783.1-201ENST00000441761 496 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 ENPP7P5-201ENST00000541031 1031 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 BRI3BPP1-201ENST00000594224 787 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 AL512343.1-201ENST00000605837 169 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 KRT8P22-201ENST00000562317 1415 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 MROH4P-201ENST00000431302 1578 ntBASIC15.58■□□□□ 0.08
IFT43Q96FT9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IFT43Q96FT9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
IFT43Q96FT9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.57■□□□□ 0.08
IFT43Q96FT9 KRT43P-201ENST00000434019 910 ntBASIC15.57■□□□□ 0.08
IFT43Q96FT9 RPS2P32-201ENST00000439199 892 ntBASIC15.57■□□□□ 0.08
IFT43Q96FT9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 AC008735.3-201ENST00000596646 500 ntBASIC15.57■□□□□ 0.08
IFT43Q96FT9 AC010319.3-201ENST00000597028 470 ntBASIC15.57■□□□□ 0.08
IFT43Q96FT9 AC107373.2-201ENST00000607735 490 ntBASIC15.57■□□□□ 0.08
IFT43Q96FT9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.57■□□□□ 0.08
IFT43Q96FT9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 DRD5P1-201ENST00000456605 1438 ntBASIC15.57■□□□□ 0.08
IFT43Q96FT9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms