Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 CHMP1AP1-201ENST00000445563 662 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 IGLV3-15-201ENST00000518356 244 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 RN7SL163P-201ENST00000583100 276 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 BNIP3P13-201ENST00000599968 566 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 PRSS30P-206ENST00000641773 873 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AC004923.1-202ENST00000642106 209 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AC020658.6-201ENST00000623564 1870 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AC068418.2-201ENST00000577309 3703 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AC018892.3-201ENST00000623986 2499 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AL157791.1-201ENST00000553667 1699 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 AL353637.1-201ENST00000451571 732 ntBASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 AC125604.1-201ENST00000496255 707 ntBASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 AP003171.2-201ENST00000528208 925 ntBASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 AC103988.2-201ENST00000561804 725 ntBASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 AC006453.1-201ENST00000636037 1257 ntBASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
U2AF1L4Q8WU68 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms