Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 DRD5P1-201ENST00000456605 1438 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AC005840.4-201ENST00000541242 2494 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 HLA-K-203ENST00000430151 1046 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 VDAC1P7-201ENST00000462417 847 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AC023310.3-201ENST00000557027 670 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AC100756.1-201ENST00000562736 682 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AC138749.3-201ENST00000567691 622 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AL049840.4-201ENST00000602422 811 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AL390955.2-201ENST00000603032 514 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 AC116165.1-201ENST00000611806 668 ntBASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLHC1Q8NHS4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 AL512638.1-201ENST00000457493 794 ntBASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CLHC1Q8NHS4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms