Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 AL356585.2-201ENST00000625078 2396 ntBASIC14.72□□□□□ -0.05
HIPK4Q8NE63 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 ACTG1P14-201ENST00000446382 1122 ntBASIC14.72□□□□□ -0.05
HIPK4Q8NE63 TIMM8BP1-201ENST00000452384 211 ntBASIC14.72□□□□□ -0.05
HIPK4Q8NE63 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 AC015802.1-201ENST00000588104 1449 ntBASIC14.72□□□□□ -0.05
HIPK4Q8NE63 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 AL731571.1-201ENST00000617058 5428 ntBASIC14.72□□□□□ -0.05
HIPK4Q8NE63 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 AC019294.4-201ENST00000561777 2905 ntBASIC14.72□□□□□ -0.05
HIPK4Q8NE63 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 UXT-AS1-201ENST00000590504 1525 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 YBX2P1-201ENST00000394192 760 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC136604.1-201ENST00000418535 575 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC040169.1-201ENST00000565382 521 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC011467.4-201ENST00000594891 528 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC084121.4-201ENST00000641598 221 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AF228730.8-201ENST00000642140 221 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.71□□□□□ -0.05
HIPK4Q8NE63 AC130686.1-201ENST00000622936 2466 ntBASIC14.71□□□□□ -0.05
HIPK4Q8NE63 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HIPK4Q8NE63 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
HIPK4Q8NE63 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIPK4Q8NE63 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HIPK4Q8NE63 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms