Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 PPY2P-201ENST00000582808 702 ntBASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 MIR6752-201ENST00000618442 71 ntBASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 AL355994.2-201ENST00000447882 704 ntBASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 AP006547.1-201ENST00000563435 692 ntBASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAM1L1Q8N609 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 RPS2P32-201ENST00000439199 892 ntBASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 CHMP1AP1-201ENST00000445563 662 ntBASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 ALG3P1-201ENST00000508806 1114 ntBASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 GCOM2-201ENST00000509133 1104 ntBASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 AC010328.2-201ENST00000597698 1111 ntBASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms