Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 CNN2P10-201ENST00000443067 918 ntBASIC16.37■□□□□ 0.21
VPS52Q8N1B4 IGHJ2P-201ENST00000454480 60 ntBASIC16.37■□□□□ 0.21
VPS52Q8N1B4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 AC004066.1-201ENST00000502488 802 ntBASIC16.37■□□□□ 0.21
VPS52Q8N1B4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 AC087481.3-201ENST00000602886 1894 ntBASIC16.36■□□□□ 0.21
VPS52Q8N1B4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 AL139094.1-201ENST00000405549 1188 ntBASIC16.36■□□□□ 0.21
VPS52Q8N1B4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ACTG1P17-201ENST00000558391 1119 ntBASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ENPP7P14-201ENST00000621765 1040 ntBASIC16.36■□□□□ 0.21
VPS52Q8N1B4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.36■□□□□ 0.21
VPS52Q8N1B4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 AC007787.1-201ENST00000588095 1583 ntBASIC16.35■□□□□ 0.21
VPS52Q8N1B4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS52Q8N1B4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms