Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 LINC01115-203ENST00000606068 577 ntBASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 AC091271.1-201ENST00000611877 1162 ntBASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 MIR6727-201ENST00000620702 65 ntBASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 AJ011931.1-201ENST00000618749 2492 ntBASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 ZBED1P1-201ENST00000502364 1930 ntBASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC105Q8IYK2 Z97205.2-201ENST00000564697 1639 ntBASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 IGHJ2P-201ENST00000454480 60 ntBASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 RPL13AP20-201ENST00000459725 609 ntBASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 AC079316.1-201ENST00000548397 411 ntBASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 HNRNPUP1-201ENST00000554987 333 ntBASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 AC097359.3-201ENST00000603982 1210 ntBASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC105Q8IYK2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC105Q8IYK2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms