Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 AC073592.8-201ENST00000624126 511 ntBASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 AC079781.5-202ENST00000641784 3743 ntBASIC15.12■□□□□ 0.01
CRLF3Q8IUI8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 AL512638.1-201ENST00000457493 794 ntBASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 AC027369.6-201ENST00000525520 931 ntBASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 AC015910.1-201ENST00000579400 975 ntBASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 SPDYE12P-201ENST00000618416 771 ntBASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 AL645728.2-202ENST00000641679 227 ntBASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CRLF3Q8IUI8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 AC241585.1-201ENST00000433527 519 ntBASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 MTND6P24-201ENST00000440466 518 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms