Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AC005740.2-201ENST00000511085 419 ntBASIC15.99■□□□□ 0.15
RNF135Q8IUD6 PGAM1P5-201ENST00000548011 764 ntBASIC15.99■□□□□ 0.15
RNF135Q8IUD6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 RN7SL736P-201ENST00000613111 269 ntBASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AC100757.4-201ENST00000626934 759 ntBASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AC011491.1-203ENST00000637688 543 ntBASIC15.99■□□□□ 0.15
RNF135Q8IUD6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF135Q8IUD6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 ACTBP8-201ENST00000403258 1108 ntBASIC15.98■□□□□ 0.15
RNF135Q8IUD6 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 ACTG1P2-201ENST00000415776 1125 ntBASIC15.98■□□□□ 0.15
RNF135Q8IUD6 ACTG1P11-201ENST00000425411 1125 ntBASIC15.98■□□□□ 0.15
RNF135Q8IUD6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 AC234782.1-201ENST00000451950 919 ntBASIC15.98■□□□□ 0.15
RNF135Q8IUD6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 AC073352.2-201ENST00000609385 439 ntBASIC15.98■□□□□ 0.15
RNF135Q8IUD6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 AC126177.1-201ENST00000547829 2218 ntBASIC15.98■□□□□ 0.15
RNF135Q8IUD6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF135Q8IUD6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 PCDHA3-202ENST00000532566 4594 ntBASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.97■□□□□ 0.15
RNF135Q8IUD6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AC013268.4-201ENST00000637413 2228 ntBASIC15.97■□□□□ 0.15
RNF135Q8IUD6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AC011742.3-201ENST00000439053 820 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms