Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.67□□□□□ -0.22
SHFQ7M4L6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 TOMM22P5-201ENST00000416399 439 ntBASIC13.67□□□□□ -0.22
SHFQ7M4L6 CNN2P11-201ENST00000429351 262 ntBASIC13.67□□□□□ -0.22
SHFQ7M4L6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 RPL13P2-201ENST00000440687 659 ntBASIC13.67□□□□□ -0.22
SHFQ7M4L6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 AC074044.1-201ENST00000609673 707 ntBASIC13.67□□□□□ -0.22
SHFQ7M4L6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 AL157414.3-201ENST00000624276 1954 ntBASIC13.67□□□□□ -0.22
SHFQ7M4L6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHFQ7M4L6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SHFQ7M4L6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 RPL37AP1-201ENST00000412502 279 ntBASIC13.66□□□□□ -0.22
SHFQ7M4L6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms