Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AC079178.1-201ENST00000420915 656 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AC006033.1-201ENST00000440505 426 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 MTX1P1-201ENST00000440904 838 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AL023775.1-201ENST00000454907 1746 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AP006547.1-201ENST00000563435 692 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 OR10B1P-201ENST00000601666 907 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AC244157.2-201ENST00000616239 1006 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AC112693.3-201ENST00000624819 1983 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AC126365.1-201ENST00000578585 1514 ntBASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 AP000593.2-201ENST00000542775 1433 ntBASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 CHMP1AP1-201ENST00000445563 662 ntBASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 GPR182-203ENST00000622922 591 ntBASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 MIR600HG-201ENST00000449175 5984 ntBASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
H3F3CQ6NXT2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms