Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SRPXP78539 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SRPXP78539 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.45□□□□□ -0.42
SRPXP78539 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.45□□□□□ -0.42
SRPXP78539 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.45□□□□□ -0.42
SRPXP78539 TIMM8BP1-201ENST00000452384 211 ntBASIC12.45□□□□□ -0.42
SRPXP78539 AC004066.1-201ENST00000502488 802 ntBASIC12.45□□□□□ -0.42
SRPXP78539 KRT18P56-201ENST00000507275 550 ntBASIC12.45□□□□□ -0.42
SRPXP78539 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.45□□□□□ -0.42
SRPXP78539 KRT8P48-201ENST00000515599 1220 ntBASIC12.45□□□□□ -0.42
SRPXP78539 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.45□□□□□ -0.42
SRPXP78539 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SRPXP78539 RN7SL510P-201ENST00000581311 263 ntBASIC12.45□□□□□ -0.42
SRPXP78539 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.45□□□□□ -0.42
SRPXP78539 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SRPXP78539 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SRPXP78539 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SRPXP78539 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SRPXP78539 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.45□□□□□ -0.42
SRPXP78539 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SRPXP78539 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRPXP78539 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SRPXP78539 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.44□□□□□ -0.42
SRPXP78539 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 AL121723.1-201ENST00000445194 1519 ntBASIC12.44□□□□□ -0.42
SRPXP78539 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.44□□□□□ -0.42
SRPXP78539 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 AC074338.1-201ENST00000416825 156 ntBASIC12.44□□□□□ -0.42
SRPXP78539 AL592309.1-201ENST00000443127 649 ntBASIC12.44□□□□□ -0.42
SRPXP78539 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.44□□□□□ -0.42
SRPXP78539 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.44□□□□□ -0.42
SRPXP78539 BANF1P1-201ENST00000553684 263 ntBASIC12.44□□□□□ -0.42
SRPXP78539 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SRPXP78539 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.44□□□□□ -0.42
SRPXP78539 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SRPXP78539 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.44□□□□□ -0.42
SRPXP78539 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRPXP78539 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRPXP78539 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SRPXP78539 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.43□□□□□ -0.42
SRPXP78539 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.43□□□□□ -0.42
SRPXP78539 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
SRPXP78539 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRPXP78539 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SRPXP78539 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SRPXP78539 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SRPXP78539 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.43□□□□□ -0.42
SRPXP78539 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms