Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 RN7SKP175-201ENST00000408472 289 ntBASIC14.41□□□□□ -0.1
CLDN6P56747 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
CLDN6P56747 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN6P56747 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 NPM1P43-201ENST00000558669 786 ntBASIC14.41□□□□□ -0.1
CLDN6P56747 AC242376.1-201ENST00000559033 726 ntBASIC14.41□□□□□ -0.1
CLDN6P56747 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN6P56747 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDN6P56747 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDN6P56747 SNORD3B-2-202ENST00000571722 791 ntBASIC14.41□□□□□ -0.1
CLDN6P56747 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN6P56747 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
CLDN6P56747 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN6P56747 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN6P56747 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CLDN6P56747 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CLDN6P56747 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 CICP11-201ENST00000434745 2827 ntBASIC14.41□□□□□ -0.1
CLDN6P56747 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN6P56747 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN6P56747 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 OR2K2-202ENST00000374428 1038 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 PUDPP3-201ENST00000445368 636 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 AC098935.1-201ENST00000446057 611 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 NOC2LP1-201ENST00000450578 752 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 DUX4L47-201ENST00000566374 394 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.4□□□□□ -0.1
CLDN6P56747 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN6P56747 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN6P56747 AC008805.1-201ENST00000590892 364 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.4□□□□□ -0.1
CLDN6P56747 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 AC006453.1-201ENST00000636037 1257 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 MBLAC2-202ENST00000514906 1936 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 AC112504.1-201ENST00000623415 1841 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 AC011840.2-201ENST00000563063 1520 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN6P56747 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 TBC1D3J-201ENST00000620719 1426 ntBASIC14.4□□□□□ -0.1
CLDN6P56747 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN6P56747 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN6P56747 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CLDN6P56747 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLDN6P56747 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 AC067930.6-201ENST00000623257 4947 ntBASIC14.39□□□□□ -0.11
CLDN6P56747 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms