Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP6P55212 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CASP6P55212 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.59□□□□□ -0.23
CASP6P55212 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.59□□□□□ -0.23
CASP6P55212 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 SAMD11P1-201ENST00000571429 661 ntBASIC13.59□□□□□ -0.23
CASP6P55212 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.59□□□□□ -0.23
CASP6P55212 AL645728.2-202ENST00000641679 227 ntBASIC13.59□□□□□ -0.23
CASP6P55212 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP6P55212 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CASP6P55212 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP6P55212 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CASP6P55212 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.58□□□□□ -0.23
CASP6P55212 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.58□□□□□ -0.23
CASP6P55212 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.58□□□□□ -0.23
CASP6P55212 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP6P55212 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP6P55212 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CASP6P55212 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP6P55212 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP6P55212 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP6P55212 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP6P55212 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP6P55212 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 MIR3619-201ENST00000579667 83 ntBASIC13.58□□□□□ -0.24
CASP6P55212 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP6P55212 AC091812.3-201ENST00000621362 345 ntBASIC13.58□□□□□ -0.24
CASP6P55212 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.58□□□□□ -0.24
CASP6P55212 AC100757.4-201ENST00000626934 759 ntBASIC13.58□□□□□ -0.24
CASP6P55212 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CASP6P55212 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms