Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 MIR326-201ENST00000362220 95 ntBASIC11.02□□□□□ -0.65
APOC4P55056 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
APOC4P55056 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 TLE1P1-201ENST00000422965 589 ntBASIC11.02□□□□□ -0.65
APOC4P55056 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.02□□□□□ -0.65
APOC4P55056 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC11.02□□□□□ -0.65
APOC4P55056 AC106820.3-201ENST00000561653 397 ntBASIC11.02□□□□□ -0.65
APOC4P55056 C2orf69P2-201ENST00000562032 1123 ntBASIC11.02□□□□□ -0.65
APOC4P55056 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.02□□□□□ -0.65
APOC4P55056 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 AL022328.3-201ENST00000607943 679 ntBASIC11.02□□□□□ -0.65
APOC4P55056 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 SSR4P1-203ENST00000599569 2260 ntBASIC11.02□□□□□ -0.65
APOC4P55056 AC068418.2-201ENST00000577309 3703 ntBASIC11.02□□□□□ -0.65
APOC4P55056 CLUHP2-201ENST00000426660 1303 ntBASIC11.02□□□□□ -0.65
APOC4P55056 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 MROH4P-201ENST00000431302 1578 ntBASIC11.02□□□□□ -0.65
APOC4P55056 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
APOC4P55056 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC4P55056 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
APOC4P55056 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
APOC4P55056 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
APOC4P55056 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC4P55056 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.01□□□□□ -0.65
APOC4P55056 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 KRT8P4-201ENST00000509735 1454 ntBASIC11.01□□□□□ -0.65
APOC4P55056 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC4P55056 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC4P55056 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.01□□□□□ -0.65
APOC4P55056 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
APOC4P55056 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
APOC4P55056 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC4P55056 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC4P55056 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
APOC4P55056 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
APOC4P55056 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.01□□□□□ -0.65
APOC4P55056 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.01□□□□□ -0.65
APOC4P55056 AC007969.1-201ENST00000433675 447 ntBASIC11.01□□□□□ -0.65
APOC4P55056 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC11.01□□□□□ -0.65
APOC4P55056 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.01□□□□□ -0.65
APOC4P55056 AL391280.1-201ENST00000506969 1062 ntBASIC11.01□□□□□ -0.65
APOC4P55056 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.01□□□□□ -0.65
APOC4P55056 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
APOC4P55056 PACS1-203ENST00000524815 628 ntTSL 4 BASIC11.01□□□□□ -0.65
APOC4P55056 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.01□□□□□ -0.65
APOC4P55056 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms