Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PSMD4P55036 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
PSMD4P55036 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PSMD4P55036 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.08□□□□□ -0.16
PSMD4P55036 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PSMD4P55036 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.07□□□□□ -0.16
PSMD4P55036 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 KRT8P14-201ENST00000414254 1442 ntBASIC14.07□□□□□ -0.16
PSMD4P55036 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.07□□□□□ -0.16
PSMD4P55036 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PSMD4P55036 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.07□□□□□ -0.16
PSMD4P55036 DGCR5-201ENST00000399539 862 ntBASIC14.07□□□□□ -0.16
PSMD4P55036 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.07□□□□□ -0.16
PSMD4P55036 RN7SL752P-201ENST00000463779 287 ntBASIC14.07□□□□□ -0.16
PSMD4P55036 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.07□□□□□ -0.16
PSMD4P55036 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 WASH4P-201ENST00000564273 1246 ntBASIC14.07□□□□□ -0.16
PSMD4P55036 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.07□□□□□ -0.16
PSMD4P55036 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.07□□□□□ -0.16
PSMD4P55036 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PSMD4P55036 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.07□□□□□ -0.16
PSMD4P55036 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.07□□□□□ -0.16
PSMD4P55036 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.07□□□□□ -0.16
PSMD4P55036 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PSMD4P55036 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 LRRC59-203ENST00000576448 1531 ntBASIC14.06□□□□□ -0.16
PSMD4P55036 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PSMD4P55036 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.06□□□□□ -0.16
PSMD4P55036 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.06□□□□□ -0.16
PSMD4P55036 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.06□□□□□ -0.16
PSMD4P55036 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
PSMD4P55036 AC022616.1-201ENST00000518688 554 ntBASIC14.06□□□□□ -0.16
PSMD4P55036 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.06□□□□□ -0.16
PSMD4P55036 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.06□□□□□ -0.16
PSMD4P55036 PTP4A1P2-201ENST00000546033 454 ntBASIC14.06□□□□□ -0.16
PSMD4P55036 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 AC025048.6-201ENST00000634326 1161 ntBASIC14.06□□□□□ -0.16
PSMD4P55036 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.06□□□□□ -0.16
PSMD4P55036 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.06□□□□□ -0.16
PSMD4P55036 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.06□□□□□ -0.16
PSMD4P55036 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.06□□□□□ -0.16
PSMD4P55036 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
PSMD4P55036 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
PSMD4P55036 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PSMD4P55036 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PSMD4P55036 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms