Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 DBET-201ENST00000630918 3363 ntBASIC16.32■□□□□ 0.2
BRCA2P51587 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
BRCA2P51587 AC003686.1-201ENST00000550956 1034 ntBASIC16.32■□□□□ 0.2
BRCA2P51587 RN7SL357P-201ENST00000581065 298 ntBASIC16.32■□□□□ 0.2
BRCA2P51587 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 AC136621.1-201ENST00000624017 2304 ntBASIC16.32■□□□□ 0.2
BRCA2P51587 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.31■□□□□ 0.2
BRCA2P51587 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.31■□□□□ 0.2
BRCA2P51587 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.31■□□□□ 0.2
BRCA2P51587 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
BRCA2P51587 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
BRCA2P51587 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.31■□□□□ 0.2
BRCA2P51587 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 BX088702.1-201ENST00000610784 235 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
BRCA2P51587 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 AC067931.2-201ENST00000623655 2003 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
BRCA2P51587 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC16.31■□□□□ 0.2
BRCA2P51587 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 RN7SL665P-201ENST00000578793 300 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 AP000769.1-203ENST00000637245 208 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.31■□□□□ 0.2
BRCA2P51587 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
BRCA2P51587 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
BRCA2P51587 RNVU1-8-201ENST00000364272 125 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCA2P51587 AC092570.1-201ENST00000414446 469 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.31■□□□□ 0.2
BRCA2P51587 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.31■□□□□ 0.2
BRCA2P51587 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 KRT18P37-201ENST00000520711 1282 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.31■□□□□ 0.2
BRCA2P51587 TRMT112P3-201ENST00000580149 358 ntBASIC16.31■□□□□ 0.2
BRCA2P51587 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.31■□□□□ 0.2
BRCA2P51587 HCG18-241ENST00000602290 821 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCA2P51587 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 SSR4P1-203ENST00000599569 2260 ntBASIC16.3■□□□□ 0.2
BRCA2P51587 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BRCA2P51587 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.3■□□□□ 0.2
BRCA2P51587 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.3■□□□□ 0.2
BRCA2P51587 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.3■□□□□ 0.2
BRCA2P51587 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.3■□□□□ 0.2
BRCA2P51587 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BRCA2P51587 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.3■□□□□ 0.2
BRCA2P51587 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 AC020763.4-201ENST00000623414 4170 ntBASIC16.3■□□□□ 0.2
BRCA2P51587 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
BRCA2P51587 OR10N1P-201ENST00000392758 869 ntBASIC16.3■□□□□ 0.2
BRCA2P51587 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.3■□□□□ 0.2
BRCA2P51587 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.3■□□□□ 0.2
BRCA2P51587 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.3■□□□□ 0.2
BRCA2P51587 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.3■□□□□ 0.2
BRCA2P51587 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.3■□□□□ 0.2
BRCA2P51587 AP000322.3-201ENST00000608665 388 ntBASIC16.3■□□□□ 0.2
BRCA2P51587 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCA2P51587 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCA2P51587 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms