Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.68■□□□□ 0.1
MMP13P45452 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.68■□□□□ 0.1
MMP13P45452 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
MMP13P45452 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 AL138799.1-201ENST00000448213 1675 ntBASIC15.67■□□□□ 0.1
MMP13P45452 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.67■□□□□ 0.1
MMP13P45452 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.67■□□□□ 0.1
MMP13P45452 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.67■□□□□ 0.1
MMP13P45452 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.67■□□□□ 0.1
MMP13P45452 AC124283.3-201ENST00000570869 594 ntBASIC15.67■□□□□ 0.1
MMP13P45452 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.67■□□□□ 0.1
MMP13P45452 CTBP2P3-201ENST00000585629 1255 ntBASIC15.67■□□□□ 0.1
MMP13P45452 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.67■□□□□ 0.1
MMP13P45452 AC133539.2-201ENST00000604757 467 ntBASIC15.67■□□□□ 0.1
MMP13P45452 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 AC018442.1-201ENST00000421439 2061 ntBASIC15.67■□□□□ 0.1
MMP13P45452 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 AL359183.1-201ENST00000623796 2132 ntBASIC15.67■□□□□ 0.1
MMP13P45452 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP13P45452 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP13P45452 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP13P45452 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.66■□□□□ 0.1
MMP13P45452 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.66■□□□□ 0.1
MMP13P45452 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MMP13P45452 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MMP13P45452 AC011474.4-201ENST00000623523 2076 ntBASIC15.66■□□□□ 0.1
MMP13P45452 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MMP13P45452 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.66■□□□□ 0.1
MMP13P45452 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MMP13P45452 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MMP13P45452 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MMP13P45452 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.66■□□□□ 0.1
MMP13P45452 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MMP13P45452 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.66■□□□□ 0.1
MMP13P45452 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP13P45452 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.66■□□□□ 0.1
MMP13P45452 SOCS2P1-201ENST00000417727 557 ntBASIC15.66■□□□□ 0.1
MMP13P45452 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
MMP13P45452 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.66■□□□□ 0.1
MMP13P45452 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.66■□□□□ 0.1
MMP13P45452 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms