Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PRPHP41219 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.98■□□□□ 0.31
PRPHP41219 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.98■□□□□ 0.31
PRPHP41219 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.98■□□□□ 0.31
PRPHP41219 SLC25A47P1-201ENST00000531577 414 ntBASIC16.98■□□□□ 0.31
PRPHP41219 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.98■□□□□ 0.31
PRPHP41219 AC025279.2-201ENST00000569730 653 ntBASIC16.98■□□□□ 0.31
PRPHP41219 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.98■□□□□ 0.31
PRPHP41219 AC008735.3-201ENST00000596646 500 ntBASIC16.98■□□□□ 0.31
PRPHP41219 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.98■□□□□ 0.31
PRPHP41219 AC007326.2-201ENST00000624224 7579 ntBASIC16.98■□□□□ 0.31
PRPHP41219 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.98■□□□□ 0.31
PRPHP41219 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.98■□□□□ 0.31
PRPHP41219 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PRPHP41219 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRPHP41219 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 AC092933.1-201ENST00000393644 945 ntBASIC16.97■□□□□ 0.31
PRPHP41219 NME2P1-201ENST00000426182 414 ntBASIC16.97■□□□□ 0.31
PRPHP41219 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 TTTY23B-201ENST00000442790 549 ntBASIC16.97■□□□□ 0.31
PRPHP41219 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.97■□□□□ 0.31
PRPHP41219 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 AC132938.2-201ENST00000579188 680 ntBASIC16.97■□□□□ 0.31
PRPHP41219 AC233724.13-201ENST00000598383 410 ntBASIC16.97■□□□□ 0.31
PRPHP41219 IGHV3-72-202ENST00000621503 303 ntBASIC16.97■□□□□ 0.31
PRPHP41219 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 AL591163.1-201ENST00000641757 987 ntBASIC16.97■□□□□ 0.31
PRPHP41219 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PRPHP41219 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
PRPHP41219 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 SALL4P5-201ENST00000419001 1760 ntBASIC16.97■□□□□ 0.31
PRPHP41219 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRPHP41219 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRPHP41219 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRPHP41219 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRPHP41219 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PRPHP41219 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PRPHP41219 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.96■□□□□ 0.31
PRPHP41219 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 AL035633.1-201ENST00000406139 838 ntBASIC16.96■□□□□ 0.31
PRPHP41219 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.96■□□□□ 0.31
PRPHP41219 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRPHP41219 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.96■□□□□ 0.31
PRPHP41219 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 AC138696.2-201ENST00000607376 223 ntBASIC16.96■□□□□ 0.31
PRPHP41219 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms