Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MIR6074-201ENST00000612054 107 ntBASIC12.93□□□□□ -0.34
CCL1P22362 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL1P22362 OR2I1P-210ENST00000642037 4691 ntBASIC12.93□□□□□ -0.34
CCL1P22362 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CCL1P22362 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL1P22362 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL1P22362 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 AC015656.1-201ENST00000624209 3578 ntBASIC12.93□□□□□ -0.34
CCL1P22362 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL1P22362 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCL1P22362 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CCL1P22362 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 LRRC59-203ENST00000576448 1531 ntBASIC12.93□□□□□ -0.34
CCL1P22362 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL1P22362 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL1P22362 AC016397.2-201ENST00000624848 1985 ntBASIC12.92□□□□□ -0.34
CCL1P22362 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 MRPL37P1-201ENST00000592451 1337 ntBASIC12.92□□□□□ -0.34
CCL1P22362 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
CCL1P22362 AC098850.1-201ENST00000419919 790 ntBASIC12.92□□□□□ -0.34
CCL1P22362 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL1P22362 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL1P22362 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CCL1P22362 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.92□□□□□ -0.34
CCL1P22362 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 AC133539.2-201ENST00000604757 467 ntBASIC12.92□□□□□ -0.34
CCL1P22362 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 INE2-201ENST00000630399 1874 ntBASIC12.92□□□□□ -0.34
CCL1P22362 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 AC011840.2-201ENST00000563063 1520 ntBASIC12.92□□□□□ -0.34
CCL1P22362 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CCL1P22362 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL1P22362 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL1P22362 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL1P22362 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CCL1P22362 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL1P22362 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms