Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.6□□□□□ -0.23
PPP3CBP16298 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 KLF2P4-201ENST00000451959 1225 ntBASIC13.6□□□□□ -0.23
PPP3CBP16298 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PPP3CBP16298 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.6□□□□□ -0.23
PPP3CBP16298 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.6□□□□□ -0.23
PPP3CBP16298 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 RPSAP52-203ENST00000622976 1023 ntBASIC13.6□□□□□ -0.23
PPP3CBP16298 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PPP3CBP16298 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PPP3CBP16298 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PPP3CBP16298 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
PPP3CBP16298 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.6□□□□□ -0.23
PPP3CBP16298 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
PPP3CBP16298 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PPP3CBP16298 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PPP3CBP16298 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.59□□□□□ -0.23
PPP3CBP16298 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.59□□□□□ -0.23
PPP3CBP16298 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PPP3CBP16298 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 AC012441.1-201ENST00000446669 685 ntBASIC13.59□□□□□ -0.23
PPP3CBP16298 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
PPP3CBP16298 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.59□□□□□ -0.23
PPP3CBP16298 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.59□□□□□ -0.23
PPP3CBP16298 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.59□□□□□ -0.23
PPP3CBP16298 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 AC079316.1-201ENST00000548397 411 ntBASIC13.59□□□□□ -0.23
PPP3CBP16298 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.59□□□□□ -0.23
PPP3CBP16298 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
PPP3CBP16298 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PPP3CBP16298 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PPP3CBP16298 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.59□□□□□ -0.23
PPP3CBP16298 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PPP3CBP16298 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PPP3CBP16298 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PPP3CBP16298 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.59□□□□□ -0.23
PPP3CBP16298 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PPP3CBP16298 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
PPP3CBP16298 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PPP3CBP16298 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.58□□□□□ -0.23
PPP3CBP16298 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PPP3CBP16298 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
PPP3CBP16298 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PPP3CBP16298 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
PPP3CBP16298 AC010327.5-201ENST00000586923 3061 ntBASIC13.58□□□□□ -0.23
PPP3CBP16298 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms