Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CD28P10747 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.79□□□□□ -0.52
CD28P10747 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.79□□□□□ -0.52
CD28P10747 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CD28P10747 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CD28P10747 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.79□□□□□ -0.52
CD28P10747 MIR663B-201ENST00000408361 115 ntBASIC11.79□□□□□ -0.52
CD28P10747 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC11.79□□□□□ -0.52
CD28P10747 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC11.79□□□□□ -0.52
CD28P10747 HSPB1P2-201ENST00000448722 546 ntBASIC11.79□□□□□ -0.52
CD28P10747 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC11.79□□□□□ -0.52
CD28P10747 IGHJ2P-201ENST00000454480 60 ntBASIC11.79□□□□□ -0.52
CD28P10747 AKR7A2P1-201ENST00000460134 915 ntBASIC11.79□□□□□ -0.52
CD28P10747 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.79□□□□□ -0.52
CD28P10747 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 ACTG1P17-201ENST00000558391 1119 ntBASIC11.79□□□□□ -0.52
CD28P10747 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CD28P10747 AC020914.3-201ENST00000594712 304 ntBASIC11.79□□□□□ -0.52
CD28P10747 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 AC073413.1-201ENST00000603927 732 ntBASIC11.79□□□□□ -0.52
CD28P10747 AC244157.2-201ENST00000616239 1006 ntBASIC11.79□□□□□ -0.52
CD28P10747 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.79□□□□□ -0.52
CD28P10747 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CD28P10747 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CD28P10747 AC018735.1-201ENST00000437208 1502 ntBASIC11.79□□□□□ -0.52
CD28P10747 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
CD28P10747 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
CD28P10747 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD28P10747 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CD28P10747 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 SLC25A24P2-201ENST00000415059 510 ntBASIC11.78□□□□□ -0.52
CD28P10747 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.78□□□□□ -0.52
CD28P10747 HLA-K-203ENST00000430151 1046 ntBASIC11.78□□□□□ -0.52
CD28P10747 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC11.78□□□□□ -0.52
CD28P10747 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.78□□□□□ -0.52
CD28P10747 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms