Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AP002414.2-201ENST00000591780 3365 ntBASIC16.78■□□□□ 0.28
CYP3A4P08684 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CYP3A4P08684 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CYP3A4P08684 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CYP3A4P08684 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.78■□□□□ 0.28
CYP3A4P08684 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CYP3A4P08684 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CYP3A4P08684 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.77■□□□□ 0.28
CYP3A4P08684 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CYP3A4P08684 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.77■□□□□ 0.28
CYP3A4P08684 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.77■□□□□ 0.28
CYP3A4P08684 FAM58BP-201ENST00000439056 645 ntBASIC16.77■□□□□ 0.28
CYP3A4P08684 AC006033.1-201ENST00000440505 426 ntBASIC16.77■□□□□ 0.28
CYP3A4P08684 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.77■□□□□ 0.28
CYP3A4P08684 AC004898.1-201ENST00000451057 766 ntBASIC16.77■□□□□ 0.28
CYP3A4P08684 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.77■□□□□ 0.28
CYP3A4P08684 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.77■□□□□ 0.28
CYP3A4P08684 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.77■□□□□ 0.28
CYP3A4P08684 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.77■□□□□ 0.28
CYP3A4P08684 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CYP3A4P08684 AC005324.6-201ENST00000587972 613 ntBASIC16.77■□□□□ 0.28
CYP3A4P08684 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.77■□□□□ 0.28
CYP3A4P08684 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CYP3A4P08684 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.77■□□□□ 0.28
CYP3A4P08684 AL023803.2-201ENST00000620080 638 ntBASIC16.77■□□□□ 0.28
CYP3A4P08684 AC022748.3-201ENST00000621828 275 ntBASIC16.77■□□□□ 0.28
CYP3A4P08684 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.77■□□□□ 0.28
CYP3A4P08684 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
CYP3A4P08684 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.77■□□□□ 0.28
CYP3A4P08684 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CYP3A4P08684 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CYP3A4P08684 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CYP3A4P08684 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CYP3A4P08684 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CYP3A4P08684 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CYP3A4P08684 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CYP3A4P08684 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.77■□□□□ 0.27
CYP3A4P08684 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.77■□□□□ 0.27
CYP3A4P08684 KRT8P29-201ENST00000420409 1371 ntBASIC16.77■□□□□ 0.27
CYP3A4P08684 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CYP3A4P08684 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.76■□□□□ 0.27
CYP3A4P08684 AC139712.1-201ENST00000378256 1875 ntBASIC16.76■□□□□ 0.27
CYP3A4P08684 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.76■□□□□ 0.27
CYP3A4P08684 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.76■□□□□ 0.27
CYP3A4P08684 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.76■□□□□ 0.27
CYP3A4P08684 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CYP3A4P08684 AL118558.3-201ENST00000607414 1079 ntBASIC16.76■□□□□ 0.27
CYP3A4P08684 AC007663.3-201ENST00000609632 465 ntBASIC16.76■□□□□ 0.27
CYP3A4P08684 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CYP3A4P08684 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CYP3A4P08684 AL354702.1-201ENST00000442006 1960 ntBASIC16.76■□□□□ 0.27
CYP3A4P08684 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CYP3A4P08684 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.76■□□□□ 0.27
CYP3A4P08684 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CYP3A4P08684 AC244394.1-201ENST00000435000 1665 ntBASIC16.75■□□□□ 0.27
CYP3A4P08684 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.75■□□□□ 0.27
CYP3A4P08684 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CYP3A4P08684 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms