Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.17□□□□□ -0.14
CTSBP07858 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.17□□□□□ -0.14
CTSBP07858 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.17□□□□□ -0.14
CTSBP07858 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 AL354877.1-201ENST00000424412 413 ntBASIC14.17□□□□□ -0.14
CTSBP07858 KLF2P1-201ENST00000447438 1042 ntBASIC14.17□□□□□ -0.14
CTSBP07858 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 AL451050.2-201ENST00000606967 682 ntBASIC14.17□□□□□ -0.14
CTSBP07858 AL022328.3-201ENST00000607943 679 ntBASIC14.17□□□□□ -0.14
CTSBP07858 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSBP07858 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTSBP07858 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSBP07858 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CTSBP07858 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CTSBP07858 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSBP07858 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CTSBP07858 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSBP07858 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSBP07858 RNMTL1P1-201ENST00000454103 560 ntBASIC14.16□□□□□ -0.14
CTSBP07858 AC131206.1-201ENST00000538078 1211 ntBASIC14.16□□□□□ -0.14
CTSBP07858 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSBP07858 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.16□□□□□ -0.14
CTSBP07858 NIFKP4-201ENST00000567275 1192 ntBASIC14.16□□□□□ -0.14
CTSBP07858 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSBP07858 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSBP07858 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSBP07858 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CTSBP07858 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 TSPY26P-202ENST00000565928 3884 ntBASIC14.16□□□□□ -0.14
CTSBP07858 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSBP07858 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CTSBP07858 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSBP07858 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSBP07858 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSBP07858 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSBP07858 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CTSBP07858 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSBP07858 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSBP07858 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSBP07858 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSBP07858 SHC1P1-201ENST00000425230 1745 ntBASIC14.15□□□□□ -0.14
CTSBP07858 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSBP07858 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSBP07858 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSBP07858 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms