Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CTSDP07339 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CTSDP07339 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.54□□□□□ -0.4
CTSDP07339 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 MTND6P24-201ENST00000440466 518 ntBASIC12.54□□□□□ -0.4
CTSDP07339 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CTSDP07339 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.54□□□□□ -0.4
CTSDP07339 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.54□□□□□ -0.4
CTSDP07339 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.54□□□□□ -0.4
CTSDP07339 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 LINC00628-201ENST00000628516 1289 ntBASIC12.54□□□□□ -0.4
CTSDP07339 AF228730.6-201ENST00000641497 218 ntBASIC12.54□□□□□ -0.4
CTSDP07339 AC084121.3-201ENST00000641716 218 ntBASIC12.54□□□□□ -0.4
CTSDP07339 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 AC130686.1-201ENST00000622936 2466 ntBASIC12.54□□□□□ -0.4
CTSDP07339 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CTSDP07339 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.54□□□□□ -0.4
CTSDP07339 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.53□□□□□ -0.4
CTSDP07339 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CTSDP07339 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 YBX2P1-201ENST00000394192 760 ntBASIC12.53□□□□□ -0.4
CTSDP07339 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.53□□□□□ -0.4
CTSDP07339 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.53□□□□□ -0.4
CTSDP07339 SERBP1P3-201ENST00000459980 809 ntBASIC12.53□□□□□ -0.4
CTSDP07339 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.53□□□□□ -0.4
CTSDP07339 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.53□□□□□ -0.4
CTSDP07339 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CTSDP07339 AL079307.3-201ENST00000556114 283 ntBASIC12.53□□□□□ -0.4
CTSDP07339 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.53□□□□□ -0.4
CTSDP07339 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms