Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.75■□□□□ 0.11
RB1P06400 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.75■□□□□ 0.11
RB1P06400 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.75■□□□□ 0.11
RB1P06400 RBM8B-201ENST00000555532 525 ntBASIC15.75■□□□□ 0.11
RB1P06400 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.75■□□□□ 0.11
RB1P06400 RPL17P45-201ENST00000586289 509 ntBASIC15.75■□□□□ 0.11
RB1P06400 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.75■□□□□ 0.11
RB1P06400 MIR6756-201ENST00000616240 63 ntBASIC15.75■□□□□ 0.11
RB1P06400 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
RB1P06400 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RB1P06400 AC024909.3-201ENST00000611513 2257 ntBASIC15.75■□□□□ 0.11
RB1P06400 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.75■□□□□ 0.11
RB1P06400 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RB1P06400 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RB1P06400 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RB1P06400 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RB1P06400 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 AP003680.1-201ENST00000598970 3660 ntBASIC15.74■□□□□ 0.11
RB1P06400 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RB1P06400 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 AC105250.1-201ENST00000509378 2057 ntBASIC15.74■□□□□ 0.11
RB1P06400 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RB1P06400 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.74■□□□□ 0.11
RB1P06400 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 TSPY25P-201ENST00000429463 745 ntBASIC15.74■□□□□ 0.11
RB1P06400 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.74■□□□□ 0.11
RB1P06400 RPSAP15-201ENST00000448168 861 ntBASIC15.74■□□□□ 0.11
RB1P06400 AC018463.1-201ENST00000456674 917 ntBASIC15.74■□□□□ 0.11
RB1P06400 AL157792.1-201ENST00000488281 530 ntBASIC15.74■□□□□ 0.11
RB1P06400 GCOM2-201ENST00000509133 1104 ntBASIC15.74■□□□□ 0.11
RB1P06400 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.74■□□□□ 0.11
RB1P06400 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.74■□□□□ 0.11
RB1P06400 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.74■□□□□ 0.11
RB1P06400 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.74■□□□□ 0.11
RB1P06400 AC009560.1-201ENST00000620208 434 ntBASIC15.74■□□□□ 0.11
RB1P06400 MIR6858-201ENST00000620733 67 ntBASIC15.74■□□□□ 0.11
RB1P06400 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 LINC01165-201ENST00000445190 1623 ntBASIC15.74■□□□□ 0.11
RB1P06400 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.74■□□□□ 0.11
RB1P06400 SALL4P5-201ENST00000419001 1760 ntBASIC15.74■□□□□ 0.11
RB1P06400 AC015909.3-201ENST00000572855 1794 ntBASIC15.74■□□□□ 0.11
RB1P06400 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RB1P06400 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.74■□□□□ 0.11
RB1P06400 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RB1P06400 LILRP1-201ENST00000444199 1370 ntBASIC15.74■□□□□ 0.11
RB1P06400 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.74■□□□□ 0.11
RB1P06400 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RB1P06400 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RB1P06400 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.73■□□□□ 0.11
RB1P06400 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.73■□□□□ 0.11
RB1P06400 AC009090.5-201ENST00000624886 2285 ntBASIC15.73■□□□□ 0.11
RB1P06400 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RB1P06400 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.73■□□□□ 0.11
RB1P06400 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RB1P06400 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RB1P06400 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RB1P06400 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.73■□□□□ 0.11
RB1P06400 AC012362.1-201ENST00000434906 739 ntBASIC15.73■□□□□ 0.11
RB1P06400 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.73■□□□□ 0.11
RB1P06400 RN7SL81P-201ENST00000493781 261 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms