Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 AL138725.1-201ENST00000407347 1314 ntBASIC15.23■□□□□ 0.03
HLA-DQB2P05538 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 INE2-201ENST00000630399 1874 ntBASIC15.23■□□□□ 0.03
HLA-DQB2P05538 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 CROCCP4-201ENST00000457096 498 ntBASIC15.23■□□□□ 0.03
HLA-DQB2P05538 KRT90P-201ENST00000549264 1064 ntBASIC15.23■□□□□ 0.03
HLA-DQB2P05538 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.23■□□□□ 0.03
HLA-DQB2P05538 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 FAM45BP-202ENST00000592932 1624 ntBASIC15.23■□□□□ 0.03
HLA-DQB2P05538 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQB2P05538 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC068418.2-201ENST00000577309 3703 ntBASIC15.22■□□□□ 0.03
HLA-DQB2P05538 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC113367.3-201ENST00000508316 1912 ntBASIC15.22■□□□□ 0.03
HLA-DQB2P05538 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 TPM3P8-201ENST00000330554 643 ntBASIC15.22■□□□□ 0.03
HLA-DQB2P05538 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 TLE1P1-201ENST00000422965 589 ntBASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC016694.1-201ENST00000434179 700 ntBASIC15.22■□□□□ 0.03
HLA-DQB2P05538 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AL391280.1-201ENST00000506969 1062 ntBASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC138696.2-201ENST00000607376 223 ntBASIC15.22■□□□□ 0.03
HLA-DQB2P05538 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC132938.4-201ENST00000623835 848 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms