Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AC107918.4-202ENST00000641623 219 ntBASIC11.39□□□□□ -0.59
HLA-DQA1P01909 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AC090505.1-201ENST00000430515 1834 ntBASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DQA1P01909 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 AC093909.1-201ENST00000504731 1122 ntBASIC11.38□□□□□ -0.59
HLA-DQA1P01909 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 AL773604.1-201ENST00000617417 272 ntBASIC11.38□□□□□ -0.59
HLA-DQA1P01909 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DQA1P01909 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms