Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RTN3O95197 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.9■□□□□ 0.14
RTN3O95197 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.9■□□□□ 0.14
RTN3O95197 FAM8A4P-201ENST00000435433 1213 ntBASIC15.9■□□□□ 0.14
RTN3O95197 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.9■□□□□ 0.14
RTN3O95197 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.9■□□□□ 0.14
RTN3O95197 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.9■□□□□ 0.14
RTN3O95197 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.9■□□□□ 0.14
RTN3O95197 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.9■□□□□ 0.14
RTN3O95197 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RTN3O95197 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.9■□□□□ 0.14
RTN3O95197 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.9■□□□□ 0.14
RTN3O95197 MROH4P-201ENST00000431302 1578 ntBASIC15.9■□□□□ 0.14
RTN3O95197 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 AC007686.3-201ENST00000619017 3487 ntBASIC15.9■□□□□ 0.14
RTN3O95197 AC067930.6-201ENST00000623257 4947 ntBASIC15.9■□□□□ 0.14
RTN3O95197 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.9■□□□□ 0.14
RTN3O95197 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.9■□□□□ 0.14
RTN3O95197 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.9■□□□□ 0.14
RTN3O95197 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RTN3O95197 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN3O95197 AC007191.1-201ENST00000623179 2995 ntBASIC15.9■□□□□ 0.14
RTN3O95197 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.89■□□□□ 0.13
RTN3O95197 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.89■□□□□ 0.13
RTN3O95197 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN3O95197 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN3O95197 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN3O95197 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN3O95197 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
RTN3O95197 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RTN3O95197 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN3O95197 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN3O95197 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RTN3O95197 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
RTN3O95197 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.89■□□□□ 0.13
RTN3O95197 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN3O95197 REXO1L6P-201ENST00000603433 1515 ntBASIC15.89■□□□□ 0.13
RTN3O95197 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.88■□□□□ 0.13
RTN3O95197 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RTN3O95197 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RTN3O95197 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN3O95197 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms