Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 MYO15B-237ENST00000642007 4893 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-2O95096 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-2O95096 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-2O95096 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NKX2-2O95096 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-2O95096 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-2O95096 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 FLJ16779-201ENST00000612722 7638 ntBASIC13.85□□□□□ -0.19
NKX2-2O95096 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.85□□□□□ -0.19
NKX2-2O95096 TPM3P8-201ENST00000330554 643 ntBASIC13.85□□□□□ -0.19
NKX2-2O95096 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-2O95096 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NKX2-2O95096 C2orf27AP3-201ENST00000434123 579 ntBASIC13.85□□□□□ -0.19
NKX2-2O95096 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-2O95096 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX2-2O95096 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX2-2O95096 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX2-2O95096 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX2-2O95096 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX2-2O95096 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-2O95096 AL354718.3-201ENST00000616414 581 ntBASIC13.85□□□□□ -0.19
NKX2-2O95096 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.85□□□□□ -0.19
NKX2-2O95096 CR382287.1-201ENST00000623954 586 ntBASIC13.85□□□□□ -0.19
NKX2-2O95096 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NKX2-2O95096 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-2O95096 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NKX2-2O95096 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-2O95096 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-2O95096 AC023908.3-201ENST00000564211 3047 ntBASIC13.85□□□□□ -0.19
NKX2-2O95096 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-2O95096 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-2O95096 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-2O95096 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NKX2-2O95096 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-2O95096 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NKX2-2O95096 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-2O95096 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-2O95096 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-2O95096 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-2O95096 FTH1P14-201ENST00000482930 551 ntBASIC13.84□□□□□ -0.19
NKX2-2O95096 RNA5SP486-201ENST00000515961 83 ntBASIC13.84□□□□□ -0.19
NKX2-2O95096 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-2O95096 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-2O95096 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 CR383656.12-201ENST00000549567 513 ntBASIC13.84□□□□□ -0.19
NKX2-2O95096 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-2O95096 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-2O95096 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms