Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 RNA5SP406-201ENST00000516106 112 ntBASIC6.5□□□□□ -1.37
USH2AO75445 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC6.5□□□□□ -1.37
USH2AO75445 HNRNPA1P5-201ENST00000558213 966 ntBASIC6.5□□□□□ -1.37
USH2AO75445 AC132812.1-201ENST00000583145 892 ntBASIC6.5□□□□□ -1.37
USH2AO75445 AC112220.4-201ENST00000604982 1263 ntBASIC6.5□□□□□ -1.37
USH2AO75445 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC6.5□□□□□ -1.37
USH2AO75445 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 AL645608.8-201ENST00000606034 2086 ntBASIC6.5□□□□□ -1.37
USH2AO75445 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 MIR645-201ENST00000385283 94 ntBASIC6.5□□□□□ -1.37
USH2AO75445 RN7SL564P-201ENST00000496309 250 ntBASIC6.5□□□□□ -1.37
USH2AO75445 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
USH2AO75445 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 ABCC6P1-203ENST00000565566 1170 ntBASIC6.5□□□□□ -1.37
USH2AO75445 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC6.5□□□□□ -1.37
USH2AO75445 CLPP-205ENST00000596605 646 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 LINC00244-201ENST00000625073 613 ntBASIC6.5□□□□□ -1.37
USH2AO75445 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 SAP18P2-201ENST00000434334 459 ntBASIC6.5□□□□□ -1.37
USH2AO75445 ZNF877P-201ENST00000437614 612 ntBASIC6.5□□□□□ -1.37
USH2AO75445 PFN2-212ENST00000490975 858 ntTSL 4 BASIC6.5□□□□□ -1.37
USH2AO75445 CCNL2P1-201ENST00000512846 969 ntBASIC6.5□□□□□ -1.37
USH2AO75445 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 MST1L-204ENST00000545160 559 ntTSL 4 BASIC6.5□□□□□ -1.37
USH2AO75445 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 Z82244.2-201ENST00000632196 448 ntBASIC6.5□□□□□ -1.37
USH2AO75445 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 AL513523.2-202ENST00000427283 2040 ntBASIC6.49□□□□□ -1.37
USH2AO75445 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 AC008026.2-201ENST00000495438 348 ntBASIC6.49□□□□□ -1.37
USH2AO75445 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC6.49□□□□□ -1.37
USH2AO75445 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 AGGF1P2-201ENST00000426656 2106 ntBASIC6.49□□□□□ -1.37
USH2AO75445 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 RPS23-207ENST00000511844 530 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 AP003170.2-201ENST00000544730 786 ntBASIC6.49□□□□□ -1.37
USH2AO75445 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
USH2AO75445 MIR4459-201ENST00000581837 66 ntBASIC6.49□□□□□ -1.37
USH2AO75445 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms