Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.77□□□□□ -0.2
RNF13O43567 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.77□□□□□ -0.2
RNF13O43567 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
RNF13O43567 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.77□□□□□ -0.2
RNF13O43567 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF13O43567 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF13O43567 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RNF13O43567 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF13O43567 MRPS18AP1-201ENST00000414458 589 ntBASIC13.77□□□□□ -0.21
RNF13O43567 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF13O43567 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF13O43567 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF13O43567 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF13O43567 CYMP-203ENST00000474680 1263 ntBASIC13.77□□□□□ -0.21
RNF13O43567 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 AC113367.3-201ENST00000508316 1912 ntBASIC13.77□□□□□ -0.21
RNF13O43567 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF13O43567 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF13O43567 AC023310.3-201ENST00000557027 670 ntBASIC13.77□□□□□ -0.21
RNF13O43567 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF13O43567 AC100756.1-201ENST00000562736 682 ntBASIC13.77□□□□□ -0.21
RNF13O43567 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 AC138749.3-201ENST00000567691 622 ntBASIC13.77□□□□□ -0.21
RNF13O43567 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF13O43567 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF13O43567 AC097359.2-201ENST00000604992 2389 ntBASIC13.77□□□□□ -0.21
RNF13O43567 AC116165.1-201ENST00000611806 668 ntBASIC13.77□□□□□ -0.21
RNF13O43567 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RNF13O43567 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF13O43567 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 BEND3P1-201ENST00000421591 1944 ntBASIC13.76□□□□□ -0.21
RNF13O43567 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF13O43567 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNF13O43567 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF13O43567 MEP1AP4-201ENST00000423244 1087 ntBASIC13.76□□□□□ -0.21
RNF13O43567 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 RN7SL399P-201ENST00000471648 279 ntBASIC13.76□□□□□ -0.21
RNF13O43567 RPL13AP25-201ENST00000484130 612 ntBASIC13.76□□□□□ -0.21
RNF13O43567 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF13O43567 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 AL049840.4-201ENST00000602422 811 ntBASIC13.76□□□□□ -0.21
RNF13O43567 AL391069.4-201ENST00000609583 481 ntBASIC13.76□□□□□ -0.21
RNF13O43567 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
RNF13O43567 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RNF13O43567 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF13O43567 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RNF13O43567 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms