Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 AC117489.1-201ENST00000625169 3217 ntBASIC12.11□□□□□ -0.47
UPK2O00526 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
UPK2O00526 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 AC138969.2-201ENST00000532739 9932 ntBASIC12.1□□□□□ -0.47
UPK2O00526 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.1□□□□□ -0.47
UPK2O00526 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
UPK2O00526 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
UPK2O00526 LINC01230-201ENST00000625222 3017 ntBASIC12.1□□□□□ -0.47
UPK2O00526 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.1□□□□□ -0.47
UPK2O00526 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
UPK2O00526 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK2O00526 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK2O00526 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.1□□□□□ -0.47
UPK2O00526 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK2O00526 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK2O00526 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 RRP7BP-205ENST00000566851 833 ntBASIC12.1□□□□□ -0.47
UPK2O00526 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK2O00526 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK2O00526 BRI3BPP1-201ENST00000594224 787 ntBASIC12.1□□□□□ -0.47
UPK2O00526 AL390955.2-201ENST00000603032 514 ntBASIC12.1□□□□□ -0.47
UPK2O00526 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
UPK2O00526 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
UPK2O00526 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.1□□□□□ -0.47
UPK2O00526 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK2O00526 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK2O00526 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
UPK2O00526 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.09□□□□□ -0.47
UPK2O00526 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
UPK2O00526 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 SPDYE19P-201ENST00000338590 713 ntBASIC12.09□□□□□ -0.47
UPK2O00526 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
UPK2O00526 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
UPK2O00526 AL139094.1-201ENST00000405549 1188 ntBASIC12.09□□□□□ -0.47
UPK2O00526 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.09□□□□□ -0.47
UPK2O00526 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.09□□□□□ -0.47
UPK2O00526 AC134915.1-201ENST00000426461 574 ntBASIC12.09□□□□□ -0.47
UPK2O00526 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.09□□□□□ -0.47
UPK2O00526 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.09□□□□□ -0.47
UPK2O00526 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.09□□□□□ -0.47
UPK2O00526 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK2O00526 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.09□□□□□ -0.47
UPK2O00526 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.09□□□□□ -0.47
UPK2O00526 DUX4L47-201ENST00000566374 394 ntBASIC12.09□□□□□ -0.47
UPK2O00526 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.09□□□□□ -0.47
UPK2O00526 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms