Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 AL139094.1-201ENST00000405549 1188 ntBASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 GHSR-202ENST00000427970 912 ntBASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 AC006453.4-201ENST00000636949 1252 ntBASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 AC144831.1-201ENST00000573312 2656 ntBASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 DBET-201ENST00000630918 3363 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 WASH3P-207ENST00000560956 1394 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 AC020907.1-201ENST00000616460 1350 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 AC138969.2-201ENST00000532739 9932 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 LINC00554-201ENST00000564841 3011 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 Z93015.1-201ENST00000451718 390 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 AC099548.2-209ENST00000480264 625 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 SAMD11P1-201ENST00000571429 661 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 AC244093.1-201ENST00000610837 814 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 PRSS30P-206ENST00000641773 873 ntBASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA2E9PIF3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms