Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CFAP99D6REC4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP99D6REC4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP99D6REC4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CFAP99D6REC4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP99D6REC4 AL360270.3-201ENST00000609118 1348 ntBASIC15.12■□□□□ 0.01
CFAP99D6REC4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP99D6REC4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CFAP99D6REC4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP99D6REC4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CFAP99D6REC4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AL139094.1-201ENST00000405549 1188 ntBASIC15.11■□□□□ 0.01
CFAP99D6REC4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AC007389.4-201ENST00000454674 793 ntBASIC15.11■□□□□ 0.01
CFAP99D6REC4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AP005018.1-201ENST00000525475 301 ntBASIC15.11■□□□□ 0.01
CFAP99D6REC4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AC010319.3-201ENST00000597028 470 ntBASIC15.11■□□□□ 0.01
CFAP99D6REC4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 PRSS30P-206ENST00000641773 873 ntBASIC15.11■□□□□ 0.01
CFAP99D6REC4 AC105233.6-201ENST00000642093 218 ntBASIC15.11■□□□□ 0.01
CFAP99D6REC4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AL137784.3-201ENST00000623858 2288 ntBASIC15.11■□□□□ 0.01
CFAP99D6REC4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 ZBED1P1-201ENST00000502364 1930 ntBASIC15.11■□□□□ 0.01
CFAP99D6REC4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CFAP99D6REC4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CFAP99D6REC4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 AP000845.1-201ENST00000581677 2131 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 ACTG1P3-201ENST00000431775 1114 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 KRT17P7-201ENST00000451704 1104 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 TDH-203ENST00000531764 1110 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 LINC01922-201ENST00000562582 719 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.1■□□□□ 0.01
CFAP99D6REC4 CLUHP6-201ENST00000580789 941 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP99D6REC4 AC015936.2-201ENST00000593177 259 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 LINC02084-201ENST00000606069 1096 ntBASIC15.1■□□□□ 0.01
CFAP99D6REC4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms